NDEx Integrated Query

Powered by NDEx and integrated with Cytoscape, IQuery uses selected pathway and a variety of interactome networks to power gene set analysis. The networks come from many different sources and new networks will be continuously added.

By doing many simultaneous queries, we present the biologist with a Google-like experience and immediate actionable results; any IQuery hit can be seamlessly opened in Cytoscape for additional analysis or saved to NDEx for later use. Alternatively, users can explore the master networks that originated those results and perform additional queries or other operations.

Example Gene Set:


Enter your gene set in the text box above or use one of the Example Gene Sets to get started. You can also visit the IQuery web-application page for more info and examples.